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Spectral–Spatial Machine Learning for Early Detection of Dutch Elm Disease Using Hyperspectral Leaf Imaging
Forest health is under mounting pressure from diseases driven by invasive pathogens, and the ability to detect these diseases early and precisely is vital for targeted, prompt forest management. Breakthroughs in spectral imaging and artificial intelligence have paved the way for novel approaches to plant disease identification in both crop and tree species. The present study employed the Dutch elm disease (DED; caused by Ophiostoma novo-ulmi) and American elm (Ulmus americana) pathosystem as a model to test the efficacy of two custom-fabricated, high-precision, portable hyper- and multispectral leaf scanners, paired with machine learning, as innovative instruments for forest disease surveillance. Hyper- and multispectral imagery was collected from leaves of American elm genotypes with varying degrees of disease susceptibility following mock inoculation and inoculation with O. novo-ulmi in controlled greenhouse conditions. Both classical machine learning and cutting-edge deep learning architectures were trained on extracted spectra and directly on spectral image volumes. Deep learning frameworks that leverage combined spectral and spatial information from high-definition spectral leaf images surpass classical machine learning approaches that rely exclusively on spectral data for DED identification. Within the deep learning framework, leaf margins and symptomatic lesions were accentuated as discriminative spatial cues for separating leaves originating from inoculated versus mock-inoculated specimens. Furthermore, the spectral and spatial signature profiles uncovered by the machine learning-based models corresponded to the DED susceptibility levels of the elm genotypes. While supplementary investigations are warranted to gauge transferability across other pathosystems, hyper- and multispectral leaf scanners integrated with machine learning show considerable promise as emerging tools for disease phenotyping in tree species.
Journal of Intelligent Agriculture and Food Systems
Original Research | Open access | 15 March 2025 | Article: 107

A Multi-Stage Computer Vision System for Disease Detection and Management in Aquaponic Leafy Vegetables
Vegetation cultivated in aquaponics environments is prone to multiple diseases or biotic pressures throughout its development, similarly to conventional farming. Timely identification of these diseases is essential to maintaining the effectiveness of the aquaponics setup and advancing its development. Aquaponics merges recirculating aquaculture with soilless hydroponic cultivation and has the potential to ensure food security, alleviate water shortages, and reduce carbon emissions. To facilitate the widespread adoption of this agricultural method, an integrated platform is required to identify plant ailments and assist scientists and growers in identifying potential causes and remedies at an early stage. This research introduces an automated plant diagnostic framework for recognizing biotic pressures and controlling diseases in four leafy green vegetables—lettuce, basil, spinach, and parsley—cultivated within an aquaponics environment. Initially, a collection of 2640 images is assembled. Subsequently, a disease identification system operating in three stages is created. The initial stage involves a crop classification mechanism that determines the plant species. The second stage comprises a disease identification mechanism that assesses the plant’s health condition. The concluding stage is a disease-detection mechanism that pinpoints diseased and healthy areas on foliage and classifies the illness. The suggested method has yielded encouraging results, achieving accuracies of 95.83%, 94.13%, and 82.13% in the three stages, respectively. The ultimate disease-detection mechanism is then combined with an ontology framework via a cloud-based interface. This ontology framework includes domain expertise concerning plant pathology, specifically the origins and remedies for various ailments of the examined leafy green vegetables, which can be automatically retrieved upon illness detection, enabling farm operators to implement preventive actions. The suggested application is important as a decision-support tool that automates health surveillance in aquaponics facilities and helps agricultural practitioners make decisions on crop and disease control.
Journal of Intelligent Agriculture and Food Systems
Original Research | Open access | 15 March 2025 | Article: 108

Groundnut Leaf Disease Classification Using an Ensemble of Deep Convolutional Neural Networks
Global food security is critically threatened by plant diseases, which can be especially catastrophic for smallholder farmers whose economic survival hinges on a productive groundnut crop. It is therefore vital to engineer an algorithm capable of early, automated plant disease diagnosis. Working alongside a pathologist, a large-scale dataset of groundnut leaf imagery was assembled to enable this automated detection. In image classification tasks, Convolutional Neural Networks have demonstrated remarkable efficiency. This investigation constructs a disease identification and classification system using a tri-CNN architecture that incorporates DenseNet169, Inception, and Xception, all of which were initially trained on the ImageNet database. The proposed ensemble strategy formulates final predictions for test data by applying two custom nonlinear functions to the decision outputs of these base learners, integrating their scores across four standard performance measures: recall, precision, accuracy, and F1-score. The tailored CNN models are thus utilized to train our system for superior results. The methodology was tested on a real-world groundnut leaf dataset. The introduced model registered an accuracy reading of 98.46%.
Journal of Intelligent Agriculture and Food Systems
Original Research | Open access | 15 March 2025 | Article: 116

Comparative Analysis of CNN Architectures and Optimization Algorithms for Olive Leaf Disease Detection
Agricultural production is affected by plant diseases, affecting both quality and quantity. Yet, forecasting these diseases demonstrates its value for crop quality and reducing the chance of yield losses. The process of detecting plant diseases—whether by the naked eye or through conventional methods—is generally painstaking, time-consuming, and subject to substantial margins of error. This work presents a comprehensive exploration of diverse CNN architectures paired with distinct optimization algorithms, applied to olive disease identification via classification methods, and identifies the optimal model for an efficient disease detector. The exploration presents a collection of 5571 olive leaf images, gathered by hand in field settings across different regions of Morocco, and additionally includes a healthy class to identify olive diseases. Moreover, a primary aim of this research was to explore the interplay between CNN architectures and optimization algorithms as measured by accuracy and additional performance indicators. The peak score in the trained models reached 100%, while the peak score in experiments without data augmentation was 92.59%. A further emphasis of this exploration is the effect of optimization algorithms on neural network functioning. Based on the experiments, the MobileNet architecture with Rmsprop outperformed the other pairings in both detection performance and efficiency.
Journal of Intelligent Agriculture and Food Systems
Original Research | Open access | 15 September 2025 | Article: 121

Multi-Crop Leaf Disease Detection Using Transfer Learning and VGG-Based Deep Learning Models
In recent years, the deployment of artificial intelligence (AI) in farming has emerged as a critical priority. Embracing technological innovation in agriculture, when pursued imaginatively, unlocks significant value. A vital procedure involves managing affected leaves throughout crop cultivation. The prompt identification, categorization, and examination of foliar diseases, together with viable remedies, perpetually foster agricultural progress. A central emphasis of our proposed study is the detection and categorization of diseases across different crops, specifically targeting tomatoes and grapes. The principal aim is to anticipate the type of disease likely to affect grape and tomato foliage at an early stage. Techniques employing Convolutional Neural Networks (CNNs) are harnessed for Multi-Crop Leaf Disease (MCLD) detection. A deep learning-centric model carried out image feature extraction to differentiate between infected and vigorous leaves. The CNN-dependent Visual Geometry Group (VGG) model is applied to achieve superior performance indicators. A collection of crop leaf imagery serves to both train and evaluate the model. Metrics gauging performance, including accuracy, sensitivity, specificity, precision, recall, and the F1-score, were determined and observed. The overarching research aim with the proposed framework is to secure steady enhancements in outcomes. The engineered model distinguishes leaves impacted by disease with heightened precision. In the experimental setup, the suggested investigation achieved 98.40% accuracy for grapevines and 95.71% for tomato plants. This body of work directly contributes to boosting agricultural food output.
Journal of Intelligent Agriculture and Food Systems
Original Research | Open access | 15 March 2025 | Article: 129